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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908684.1_cds_XP_016458861.1_52448
CDS Infomation

[gene=LOC107782491] [db_xref=GeneID:107782491] [protein=proline-rich receptor-like protein kinase PERK1] [protein_id=XP_016458861.1] [location=complement(join(24883..25164,26148..26309,26797..26944,27757..27833,28185..28255,29272..29358,29663..30211,30396..31185))] [gbkey=CDS]
Sequence

ATGGACAATTCTCCTTCATCTTCTCCTCCTTCGCCTTCTTCGTCTTCTACTCCTCCTCCT
CCTCCTCCAGAGTCCTCTCCTCCTCCGTCTTCGCCTCCTCCTTCATCTTCTCTTCCTCCT
CCTGAATCTTCGCCTCCTCCCTCTTCACCTCCTCCCTCTTCACCACCGCCCCCATCTCCT
GAAGCGCCACCGTCGAAATCTGACAATTCTCCTCCCCCTCCATCCCCCGAAACACCACCA
CCGAAATCTGATTCTCCTCCTCCTGCATCACCACCACGTCCTACAGAATCTCCTTCGCCA
CCACCCACAGAGTCTCCTCCACCACCGAAATCTGATTCTCCTCCTCCTCCTTCTGACACA
CCTACGGAATCACCACCACCCTCATCACCCTCACCCTCACCCTCACCCTCACCGCCACCA
CCTACCACGAACACAACACCCCCTCCTCCCAAAAATGCCTCAACTACTCAACCTAATTCT
CCTCCATCACCTATATTCTCTCCACCACCTCCTGTTTCTCCACAATCACCTCTACCTCCT
CCTGAAAAGTTAACTCCTCCTCCACTTTCTCCACCTTCGCGAGATGCACCATCGAATAAA
TCACATGGTTCCTCAGGAAGCAATAACTCGCCACCATCTAATAATTCCTCATCTACCTCA
AATGTGGTAATAGTAGCTGCAATAGCTGTGGCAGGTTTATTGATTCTTGCACTTGTAATT
GTCTGCCTATTATGCAATAGAAAGAAGAAGAAACAACCTTACTATGTGGATCCTGCACGT
CCACCTCATGGTGGTGATCCCTATTACAATACCGCCAATTATTCAACCAGTCCTCAACCA
AATACTGACCACATTGTTAAGCTAGCTCCACCACCAGGTGTAATGGGAACTCCTCTAGAA
GGACCACGCGGGTGGGCCCCGCCACCGCCGCCTCCGGCCGCCAACACGAGCAGTGAATTT
AGCTCAGGTTATTCAAGCCATGTACCTGGGGGGACAATCCCACCAAAATCACCTAATCTT
GGTGGACTTGCAAAAATTCAATTCACTTATGAGGACTTAGCAACAGCTACAGGTGGATTT
TCTCAAGCCAATTTGTTAGGACAAGGAGGATTTGGGTTTGTACACAAAGGTGTTTTGACT
GATGGAATTATTGTTGCGGTAAAGAGTTTGAAATCTGGGAGTGGACAAGGTGAAAGAGAA
TTTCAAGCTGAAGTTGAGATTATTAGCAGAGTTCATCATAGGCATCTTGTTTCTCTTGTT
GGATTTTGCATTGCTGATGGACAGAGAATGTTGGTCTATGAATTTGTTCCAAATGGAACC
TTGGAGTTTCATCTTCATGGCAAAGGTCGACCTGTCATGGATTGGGAAACAAGGCTTAAA
ATTGCGTTGGGATCAGCCAAGGGACTGGCTTACCTCCACGAAGATTGTCATCCTCGCATT
ATCCACCGTGACATTAAGGCTGCAAACATTCTACTTGATAACAATTATGAAGCCATGGTG
GCAGATTTTGGATTGGCTAAACTTACAGAAGACACCAATACTCATGTGTCGACCCGTGTT
ATGGGAACCTTTGGGTACTTAGCGCCAGAATATGCATCAAGTGGTAAGCTAACAGAGAAA
TCAGATGTGTTTTCATTTGGAGTCATGCTATTGGAACTCATAACAGGGAGGAGACCTCTG
GATACTACCAATAAACTCATGGAAGACTGCCTAGTAGACTGGGCTAGACCCTTTCTTGCA
AAAGCATTGGAAGAGAATCAATACGATGAATTGGTAGACGCGCGACTGGAAGGAAAATTT
GATTCCGATGAGCTGCATCGGATGGTAGCTTGTGCTGCCGCTAGCGTTCGCCATTCTGCC
AAAAGACGTCCAAGAATGAGCCAGATAGTACGTGCCTTGGATGGTGATTCCTCATTGGAG
GACTTAAATGAAAAAACTGGCAAAAATACAGCTAACTTTGGCAATGGGGCGGCCTCTGAT
ATTTACGATACTCGTGCATACAATGCTGATATGATGAAGTTTAGGCAAATGGTAATGACA
AGCCAAGACTTCAACAGCAGTGAATATGGAGCTACAAGTGATTATGGACTCAATCCTTCT
TCCTCAAGCAGTGAATTCAGTTCTGAGTACGGTTATTCAGGAGGCCACCAAAAGCAAACA
AAATGA

Peptide Sequence

PEP ID

XP_016458861.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK1 [Nicotiana tabacum]
Sequence

MDNSPSSSPPSPSSSSTPPPPPPESSPPPSSPPPSSSLPPPESSPPPSSPPPSSPPPPSP
EAPPSKSDNSPPPPSPETPPPKSDSPPPASPPRPTESPSPPPTESPPPPKSDSPPPPSDT
PTESPPPSSPSPSPSPSPPPPTTNTTPPPPKNASTTQPNSPPSPIFSPPPPVSPQSPLPP
PEKLTPPPLSPPSRDAPSNKSHGSSGSNNSPPSNNSSSTSNVVIVAAIAVAGLLILALVI
VCLLCNRKKKKQPYYVDPARPPHGGDPYYNTANYSTSPQPNTDHIVKLAPPPGVMGTPLE
GPRGWAPPPPPPAANTSSEFSSGYSSHVPGGTIPPKSPNLGGLAKIQFTYEDLATATGGF
SQANLLGQGGFGFVHKGVLTDGIIVAVKSLKSGSGQGEREFQAEVEIISRVHHRHLVSLV
GFCIADGQRMLVYEFVPNGTLEFHLHGKGRPVMDWETRLKIALGSAKGLAYLHEDCHPRI
IHRDIKAANILLDNNYEAMVADFGLAKLTEDTNTHVSTRVMGTFGYLAPEYASSGKLTEK
SDVFSFGVMLLELITGRRPLDTTNKLMEDCLVDWARPFLAKALEENQYDELVDARLEGKF
DSDELHRMVACAAASVRHSAKRRPRMSQIVRALDGDSSLEDLNEKTGKNTANFGNGAASD
IYDTRAYNADMMKFRQMVMTSQDFNSSEYGATSDYGLNPSSSSSEFSSEYGYSGGHQKQT
K

Transcript Sequence

Gene sequence data has not been registered.